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Journal Articles Journal of Biological Chemistry Year : 2002

Mechanism-based Inhibition of Enzyme I of the Escherichia coli Phosphotransferase System

Karin Flükiger
  • Function : Author
Johannes Hewel
  • Function : Author
Regula Gutknecht
  • Function : Author
Christian Siebold
  • Function : Author
Stefan Schürch
  • Function : Author
Bernhard Erni
  • Function : Author
Luis Fernando García-Alles

Abstract

Four phosphoenolpyruvate (PEP) derivatives, carrying reactive or activable chemical functions in each of the three chemical regions of PEP, were assayed as alternative substrates of enzyme I (EI) of the Escherichia coli PEP:glucose phosphotransferase system. The Z- and E-isomers of 3-chlorophosphoenolpyruvate (3-Cl-PEP) were substrates, presenting K(m) values of 0.08 and 0.12 mm, respectively, very similar to the K(m) of 0.14 mm measured for PEP, and k(cat) of 40 and 4 min(-1), compared with 2,200 min(-1), for PEP. The low catalytic efficiency of these substrates permits the study of activity at in vivo EI concentrations. Z-Cl-PEP was a competitive inhibitor of PEP with a K(I) of 0.4 mm. E-Cl-PEP was not an inhibitor. Compounds 3 and 4, obtained by modification of the carboxylic and phosphate groups of PEP, were neither substrates nor inhibitors of EI, highlighting the importance of these functionalities for recognition by EI. Z-Cl-PEP is a suicide inhibitor. About 10-50 turnovers sufficed to inactivate EI completely. Such a property can be exploited to reveal and quantitate phosphoryl transfer from EI to other proteins at in vivo concentrations. Inactivation was saturatable in Z-Cl-PEP, with an apparent K(m)(inact) of 0.2-0.4 mm. The rate of inactivation increased with the concentration of EI, indicating a preferential or exclusive reaction with the dimeric form of EI. E-Cl-PEP inactivates EI much more slowly, and unlike PEP, it did not protect against inactivation by Z-Cl-PEP. This and the ineffectiveness of E-Cl-PEP as a competitive inhibitor have been related to the presence of two EI active species. Cys-502 of EI was identified by mass spectrometry as the reacting residue. The C502A EI mutant showed less than 0.06% wild-type activity. Sequence alignments and comparisons of x-ray structures of different PEP-utilizing enzymes indicate that Cys-502 might serve as a proton donor during catalysis.

Dates and versions

hal-03367177 , version 1 (06-10-2021)

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Luis Fernando Garcia-Alles, Karin Flükiger, Johannes Hewel, Regula Gutknecht, Christian Siebold, et al.. Mechanism-based Inhibition of Enzyme I of the Escherichia coli Phosphotransferase System. Journal of Biological Chemistry, 2002, 277 (9), pp.6934-6942. ⟨10.1074/jbc.M110067200⟩. ⟨hal-03367177⟩

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